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  • Top cofit genes for PP_5107 from Pseudomonas putida KT2440

    Monofunctional biosynthetic peptidoglycan transglycosylase
    SEED: Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)
    KEGG: monofunctional biosynthetic peptidoglycan transglycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2077 diaminopimelate decarboxylase 0.38 0.29
    2 PP_4342 flagellar synthesis regulator, putative ATPase 0.23 0.28
    3 PP_0504 Outer membrane protein OprG no 0.23
    4 PP_1318 Cytochrome b no 0.23
    5 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.24 0.23
    6 PP_4008 ATP-dependent serine protease 0.16 0.23
    7 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.51 0.23
    8 PP_4546 ATP-dependent helicase HrpA 0.43 0.23
    9 PP_3073 3-hydroxybutyrate dehydrogenase no 0.23
    10 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.32 0.22
    11 PP_4332 Chemotaxis protein CheW no 0.21
    12 PP_0397 protein kinase 0.42 0.21
    13 PP_0951 Ribosome hibernation promoting factor 0.75 0.21
    14 PP_4880 exoribonuclease R 0.48 0.21
    15 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.83 0.21
    16 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.20
    17 PP_0396 conserved protein of unknown function 0.40 0.20
    18 PP_5294 Ribonuclease PH 0.52 0.20
    19 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.20
    20 PP_0489 formate dehydrogenase-O major subunit 0.40 0.20

    Or look for negative cofitness