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  • Top cofit genes for PP_5086 from Pseudomonas putida KT2440

    putative nuclease (SNase domain protein)
    SEED: Thermonuclease family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.41
    2 PP_1798 Outer membrane efflux protein no 0.40
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.41 0.40
    4 PP_1627 conserved protein of unknown function no 0.39
    5 PP_1774 conserved exported protein of unknown function no 0.39
    6 PP_0540 conserved inner membrane protein no 0.39
    7 PP_1871 Protease HtpX no 0.38
    8 PP_3627 conserved protein of unknown function no 0.38
    9 PP_2148 transcription-repair coupling factor no 0.37
    10 PP_5283 periplasmic dipeptide transport protein 0.36 0.37
    11 PP_1663 conserved exported protein of unknown function 0.70 0.36
    12 PP_5284 UPF0758 protein PP_5284 no 0.36
    13 PP_1797 HlyD family secretion protein no 0.34
    14 PP_1204 putative Lipoprotein no 0.34
    15 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.33
    16 PP_4495 aromatic amino acid transport protein no 0.32
    17 PP_5279 conserved protein of unknown function no 0.31
    18 PP_1523 conserved protein of unknown function no 0.31
    19 PP_2098 D-alanyl-D-alanine carboxypeptidase 0.68 0.31
    20 PP_4872 putative enzyme of unknown function no 0.30

    Or look for negative cofitness