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  • Top cofit genes for PP_5083 from Pseudomonas putida KT2440

    putative Type IV pili biogenesis protein PilM
    SEED: Type IV pilus biogenesis protein PilM
    KEGG: type IV pilus assembly protein PilM

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4316 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.19
    2 PP_0506 putative ABC efflux transporter, permease protein no 0.18
    3 PP_2714 Sensor histidine kinase no 0.17
    4 PP_2580 conserved protein of unknown function no 0.17
    5 PP_4593 conserved protein of unknown function no 0.16
    6 PP_1094 putative electron transport complex protein no 0.16
    7 PP_2815 conserved protein of unknown function no 0.16
    8 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase no 0.16
    9 PP_3328 putative Ring-cleaving dioxygenase no 0.16
    10 PP_2348 Sensor histidine kinase no 0.16
    11 PP_4855 Osmotically-inducible lipoprotein OsmE no 0.15
    12 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB no 0.15
    13 PP_1508 conserved protein of unknown function no 0.15
    14 PP_0508 conserved exported protein of unknown function no 0.15
    15 PP_4588 putative oxidoreductase (nitroreductase family) no 0.15
    16 PP_2741 conserved membrane protein of unknown function no 0.15
    17 PP_1409 ribosomal small subunit pseudouridine synthase A no 0.15
    18 PP_1644 NAD(P)H dehydrogenase (quinone) no 0.14
    19 PP_1065 membrane protein required for efficient alginate biosynthesis no 0.14
    20 PP_3376 putative phosphonate dehydrogenase no 0.14

    Or look for negative cofitness