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  • Top cofit genes for PP_5081 from Pseudomonas putida KT2440

    Type IV pili biogenesis protein
    SEED: Type IV pilus biogenesis protein PilO / Type IV pilus biogenesis protein PilP
    KEGG: type IV pilus assembly protein PilO; type IV pilus assembly protein PilP

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0043 cation efflux system protein no 0.22
    2 PP_2376 Esterified fatty acid cis/trans isomerase no 0.21
    3 PP_1797 HlyD family secretion protein no 0.20
    4 PP_4924 Serine protease, subtilase family no 0.19
    5 PP_4632 dihydrofolate reductase / dihydromonapterin reductase no 0.18
    6 PP_0016 conserved hypothetical protein no 0.18
    7 PP_3627 conserved protein of unknown function no 0.17
    8 PP_1523 conserved protein of unknown function no 0.17
    9 PP_5497 conserved protein of unknown function with rhs repeat-associated core domain no 0.17
    10 PP_1781 putative O-acyltransferase no 0.17
    11 PP_5134 conserved protein of unknown function no 0.17
    12 PP_1918 septation protein no 0.17
    13 PP_2781 putative beta-ketoacyl synthase no 0.17
    14 PP_2871 Class II aldolase/adducin domain protein no 0.16
    15 PP_0896 Carbon-nitrogen hydrolase family protein 0.35 0.16
    16 PP_2714 Sensor histidine kinase no 0.16
    17 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.16
    18 PP_4948 Acyl-CoA dehydrogenase family protein no 0.16
    19 PP_0314 conserved protein of unknown function no 0.16
    20 PP_4164 Alpha/beta hydrolase no 0.15

    Or look for negative cofitness