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  • Top cofit genes for PP_5080 from Pseudomonas putida KT2440

    type 4 pili biogenesis protein
    SEED: Type IV pilus biogenesis protein PilQ
    KEGG: type IV pilus assembly protein PilQ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2209 2-aminoethylphosphonate--pyruvate transaminase no 0.20
    2 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) no 0.19
    3 PP_3726 Enoyl-CoA hydratase/isomerase family protein no 0.18
    4 PP_1880 Outer membrane autotransporter 0.42 0.18
    5 PP_4405 Sensory box protein no 0.18
    6 PP_5136 ABC transporter, permease protein no 0.17
    7 PP_0534 putative Transcriptional regulator PfeR no 0.17
    8 PP_0669 Outer membrane ferric siderophore receptor no 0.17
    9 PP_3804 conserved exported protein of unknown function no 0.17
    10 PP_4957 conserved protein of unknown function no 0.16
    11 PP_3249 putative oxidoreductase no 0.16
    12 PP_4607 putative Transmembrane sensor no 0.16
    13 PP_0693 conserved protein of unknown function no 0.16
    14 PP_4276 Chromosome partition protein Smc no 0.16
    15 PP_1853 Transcriptional regulator, LysR family no 0.16
    16 PP_4446 putative Group II intron-encoding maturase no 0.16
    17 PP_4922 Phosphomethylpyrimidine synthase no 0.16
    18 PP_0581 3-oxoacyl-(Acyl-carrier-protein) reductase no 0.15
    19 PP_0340 Glutamate-ammonia-ligase adenylyltransferase no 0.15
    20 PP_5104 thiazole synthase no 0.15

    Or look for negative cofitness