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  • Top cofit genes for PP_5072 from Pseudomonas putida KT2440

    efflux transporter
    SEED: Permeases of the major facilitator superfamily
    KEGG: MFS transporter, YNFM family, putative membrane transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4059 fused trehalose synthase B/maltokinase 0.30 0.32
    2 PP_5182 polyamine:pyruvate transaminase no 0.27
    3 PP_3761 Sensor histidine kinase/response regulator no 0.22
    4 PP_4959 diguanylate cyclase 0.42 0.21
    5 PP_5071 putative DNA-binding transcriptional regulator 0.60 0.18
    6 PP_4762 Acyl-CoA thioesterase II 0.37 0.18
    7 PP_4412 conserved protein of unknown function no 0.17
    8 PP_0864 ornithine decarboxylase no 0.16
    9 PP_1279 Probable alginate O-acetylase AlgJ no 0.16
    10 PP_4583 putative Peptidase 0.39 0.16
    11 PP_1824 Smr domain protein no 0.15
    12 PP_4798 putative Membrane-bound lytic murein transglycosylase 0.34 0.15
    13 PP_5406 transposase no 0.15
    14 PP_5068 conserved protein of unknown function, UPF0061 family 0.50 0.15
    15 PP_1698 Major facilitator family transporter no 0.15
    16 PP_0873 putrescine-binding periplasmic protein no 0.14
    17 PP_4160 K+ transporting ATPase, KdpB subunit 0.55 0.14
    18 PP_1452 MutT/nudix family protein 0.52 0.14
    19 PP_4363 Sensor histidine kinase/response regulator 0.73 0.14
    20 PP_5279 conserved protein of unknown function no 0.14

    Or look for negative cofitness