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  • Top cofit genes for PP_5071 from Pseudomonas putida KT2440

    putative DNA-binding transcriptional regulator
    SEED: LysR family transcriptional regulator YnfL

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4661 modulator of drug activity B no 0.20
    2 PP_5072 efflux transporter 0.60 0.18
    3 PP_1296 Carboxylesterase 2 0.26 0.16
    4 PP_0248 Probable alpha-L-glutamate ligase no 0.15
    5 PP_5594 conserved protein of unknown function no 0.15
    6 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein 0.24 0.15
    7 PP_1008 RNA polymerase subunit sigma-24 no 0.14
    8 PP_2119 putative ABC efflux transporter, permease/ATP-binding protein 0.59 0.14
    9 PP_5357 Pyridoxamine kinase 0.36 0.14
    10 PP_2871 Class II aldolase/adducin domain protein 0.34 0.14
    11 PP_1477 ssDNA-specific exonuclease RecJ 0.38 0.14
    12 PP_5406 transposase no 0.14
    13 PP_5284 UPF0758 protein PP_5284 0.27 0.14
    14 PP_1797 HlyD family secretion protein no 0.14
    15 PP_3627 conserved protein of unknown function no 0.14
    16 PP_4498 Segregation and condensation protein A no 0.14
    17 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.44 0.13
    18 PP_2118 conserved protein of unknown function no 0.13
    19 PP_1308 methionine gamma-lyase no 0.13
    20 PP_1627 conserved protein of unknown function no 0.13

    Or look for negative cofitness