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  • Top cofit genes for PP_5063 from Pseudomonas putida KT2440

    betaine aldehyde dehydrogenase, NAD-dependent
    SEED: Betaine aldehyde dehydrogenase (EC 1.2.1.8)
    KEGG: betaine-aldehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0123 DNA polymerase I, 5 0.64 0.39
    2 PP_4880 exoribonuclease R 0.43 0.34
    3 PP_5064 choline dehydrogenase 0.93 0.34
    4 PP_4546 ATP-dependent helicase HrpA 0.36 0.33
    5 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I no 0.33
    6 PP_4124 NADH-quinone oxidoreductase subunit G 0.57 0.32
    7 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.35 0.31
    8 PP_4722 Transcription elongation factor GreA 0.54 0.31
    9 PP_4121 NADH-quinone oxidoreductase subunit C/D no 0.31
    10 PP_1318 Cytochrome b 0.66 0.30
    11 PP_4261 cation-transporting P-type ATPase no 0.30
    12 PP_5338 aspartate ammonia-lyase no 0.30
    13 PP_1994 tRNA pseudouridine (38-40)synthase 0.61 0.30
    14 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 0.30 0.29
    15 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase no 0.29
    16 PP_2223 conserved protein of unknown function no 0.29
    17 PP_2378 Fe/S biogenesis protein NfuA 0.22 0.28
    18 PP_5294 Ribonuclease PH 0.37 0.28
    19 PP_0888 Photosynthetic apparatus regulatory protein RegA 0.24 0.28
    20 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.28

    Or look for negative cofitness