Top cofit genes for PP_5058 from Pseudomonas putida KT2440

Carboxy-terminal-processing protease
SEED: Carboxyl-terminal protease (EC 3.4.21.102)
KEGG: carboxyl-terminal processing protease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0725		conserved hypothetical TPR repeat protein	0.99	0.81
2	PP_1204		putative Lipoprotein	0.87	0.62
3	PP_0540		conserved inner membrane protein	0.86	0.56
4	PP_1663		conserved exported protein of unknown function	0.71	0.55
5	PP_5113		predicted Zn-dependent peptidases	0.71	0.55
6	PP_4198		OmpA family protein	0.84	0.55
7	PP_0958		phospholipid ABC transporter ATP-binding subunit	0.87	0.54
8	PP_2148		transcription-repair coupling factor	0.53	0.54
9	PP_1627		conserved protein of unknown function	0.74	0.53
10	PP_1798		Outer membrane efflux protein	no	0.52
11	PP_0789		N-acetyl-anhydromuramyl-L-alanine-amidase	0.79	0.52
12	PP_1871		Protease HtpX	0.82	0.52
13	PP_0066		Ribosomal RNA small subunit methyltransferase B	0.60	0.52
14	PP_0405		conserved protein of unknown function	0.82	0.52
15	PP_0960		phospholipid ABC transporter binding protein	0.80	0.51
16	PP_5283		periplasmic dipeptide transport protein	0.58	0.51
17	PP_1777		phosphomannomutase	no	0.50
18	PP_0961		toluene tolerance protein	0.76	0.50
19	PP_3627		conserved protein of unknown function	no	0.49
20	PP_1626		DNA mismatch repair protein MutS	0.69	0.49

Or look for negative cofitness