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  • Top cofit genes for PP_5053 from Pseudomonas putida KT2440

    Protein-export protein SecB
    SEED: Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state)
    KEGG: preprotein translocase subunit SecB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4171 conserved exported protein of unknown function 0.53 0.65
    2 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.60
    3 PP_1663 conserved exported protein of unknown function 0.53 0.50
    4 PP_2889 putative Transmembrane regulator PrtR no 0.49
    5 PP_5706 Sec translocation complex - SecG subunit 0.54 0.49
    6 PP_1238 putative Lipoprotein 0.89 0.47
    7 PP_4173 Sensor histidine kinase/response regulator 0.53 0.46
    8 PP_2387 conserved protein of unknown function no 0.42
    9 PP_1112 conserved membrane protein of unknown function no 0.42
    10 PP_4172 conserved exported protein of unknown function 0.32 0.42
    11 PP_4100 Transcriptional regulator, Cro/CI family no 0.41
    12 PP_1761 diguanylate cyclase with phosphodiesterase domain no 0.39
    13 PP_2144 Transcriptional regulator, TetR family 0.43 0.39
    14 PP_0355 Response regulator no 0.38
    15 PP_4836 conserved exported protein of unknown function 0.29 0.38
    16 PP_0111 Electron transport protein SCO1/SenC 0.52 0.37
    17 PP_0856 conserved lipoprotein of unknown function 0.72 0.37
    18 PP_4994 conserved protein of unknown function 0.50 0.37
    19 PP_1918 septation protein 0.63 0.36
    20 PP_1719 Tail-specific protease prc 0.71 0.36

    Or look for negative cofitness