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  • Top cofit genes for PP_5052 from Pseudomonas putida KT2440

    tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent
    SEED: tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
    KEGG: RNA methyltransferase, TrmH family, group 2

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0160 putative ferrioxamine receptor 0.16 0.24
    2 PP_3681 putative Helicase no 0.20
    3 PP_3845 putrescine-binding periplasmic protein 0.23 0.18
    4 PP_1937 putative helicase no 0.17
    5 PP_3106 conserved protein of unknown function no 0.17
    6 PP_2241 putative major facilitator family transporter no 0.16
    7 PP_2240 putative ABC efflux transporter, permease/ATP-binding protein 0.26 0.16
    8 PP_4077 conserved protein of unknown function no 0.15
    9 PP_4115 conserved exported protein of unknown function no 0.15
    10 PP_0154 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) 0.22 0.15
    11 PP_3781 Oxygen-independent Coproporphyrinogen III oxidase family protein no 0.15
    12 PP_4675 methionine sulfoxide reductase heme-binding subunit 0.40 0.14
    13 PP_5404 Transposition protein, TnsC-related protein no 0.14
    14 PP_2288 Phage tail fiber protein no 0.14
    15 PP_5740 protein of unknown function no 0.14
    16 PP_5527 phage transcriptional regulator no 0.14
    17 PP_1955 Cytochrome P450 family protein no 0.14
    18 PP_t12 tRNA-Thr no 0.14
    19 PP_2874 conserved protein of unknown function no 0.14
    20 PP_5464 protein of unknown function no 0.14

    Or look for negative cofitness