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Cofit
Protein
Homologs
Top cofit genes for PP_5045 from
Pseudomonas putida KT2440
tRNA sulfurtransferase
KEGG: thiamine biosynthesis protein ThiI
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_5309
oxidative and nitrosative stress transcriptional dual regulator
0.76
0.44
2
PP
_5310
junction-specific ATP-dependent DNA helicase
0.79
0.42
3
PP
_0872
Peptide chain release factor 3
0.78
0.40
4
PP
_5146
RNA pyrophosphohydrolase
0.66
0.39
5
PP
_4726
Chaperone protein DnaJ
no
0.39
6
PP
_0949
putative ATP-binding protein UPF0042
0.74
0.38
7
PP
_4880
exoribonuclease R
0.77
0.38
8
PP
_5145
phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins)
no
0.37
9
PP
_1734
Probable septum site-determining protein MinC
no
0.36
10
PP
_4875
conserved membrane protein of unknown function
0.71
0.36
11
PP
_1783
dTDP-glucose pyrophosphorylase
no
0.35
12
PP
_4629
Sensory box protein
no
0.35
13
PP
_2889
putative Transmembrane regulator PrtR
no
0.35
14
PP
_0397
protein kinase
0.79
0.35
15
PP
_0396
conserved protein of unknown function
0.82
0.35
16
PP
_0395
putative type IV piliation protein
0.81
0.34
17
PP
_4008
ATP-dependent serine protease
0.86
0.34
18
PP
_4892
integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex
0.70
0.33
19
PP
_0123
DNA polymerase I, 5
0.69
0.33
20
PP
_4204
antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor
no
0.33
Or look for
negative cofitness