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  • Top cofit genes for PP_5045 from Pseudomonas putida KT2440

    tRNA sulfurtransferase
    KEGG: thiamine biosynthesis protein ThiI

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.76 0.44
    2 PP_5310 junction-specific ATP-dependent DNA helicase 0.79 0.42
    3 PP_0872 Peptide chain release factor 3 0.78 0.40
    4 PP_5146 RNA pyrophosphohydrolase 0.66 0.39
    5 PP_4726 Chaperone protein DnaJ no 0.39
    6 PP_0949 putative ATP-binding protein UPF0042 0.74 0.38
    7 PP_4880 exoribonuclease R 0.77 0.38
    8 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) no 0.37
    9 PP_1734 Probable septum site-determining protein MinC no 0.36
    10 PP_4875 conserved membrane protein of unknown function 0.71 0.36
    11 PP_1783 dTDP-glucose pyrophosphorylase no 0.35
    12 PP_4629 Sensory box protein no 0.35
    13 PP_2889 putative Transmembrane regulator PrtR no 0.35
    14 PP_0397 protein kinase 0.79 0.35
    15 PP_0396 conserved protein of unknown function 0.82 0.35
    16 PP_0395 putative type IV piliation protein 0.81 0.34
    17 PP_4008 ATP-dependent serine protease 0.86 0.34
    18 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.70 0.33
    19 PP_0123 DNA polymerase I, 5 0.69 0.33
    20 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.33

    Or look for negative cofitness