Top cofit genes for PP_5023 from Pseudomonas putida KT2440

Amino acid ABC transporter, permease protein
SEED: Amino acid ABC transporter, permease protein

Rank Hit Name Description Conserved? Cofitness  
1 PP_5024 Amino acid ABC transporter, periplasmic amino acid-binding protein 0.88 0.36
2 PP_4484 histidine / lysine / arginine / ornithine ABC transporter - permease subunit 0.65 0.33
3 PP_4483 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit 0.47 0.31
4 PP_4485 histidine / lysine / arginine / ornithine ABC transporter - permease subunit 0.68 0.30
5 PP_4486 lysine / arginine / ornithine ABC transporter - periplasmic binding protein 0.68 0.28
6 PP_0927 aromatic amino acid transport protein no 0.20
7 PP_1617 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase no 0.20
8 PP_3246 Beta-carotene hydroxylase no 0.19
9 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate 0.37 0.18
10 PP_5091 conserved membrane protein of unknown function no 0.18
11 PP_4495 aromatic amino acid transport protein no 0.17
12 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily no 0.17
13 PP_5086 putative nuclease (SNase domain protein) no 0.17
14 PP_5323 Peptidase, M23/M37 family no 0.16
15 PP_4063 putative Long-chain-fatty-acid-CoA ligase no 0.16
16 PP_2406 putative quinate/shikimate dehydrogenase no 0.16
17 PP_3723 putative 2-ketoarginine decarboxylase AruI 0.33 0.16
18 PP_1821 Glutathione S-transferase family protein 0.14 0.16
19 PP_0225 sulfur compound ABC transporter - ATP-binding subunit no 0.16
20 PP_1789 Hydrolase, haloacid dehalogenase-like family no 0.16

Or look for negative cofitness