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  • Top cofit genes for PP_5001 from Pseudomonas putida KT2440

    protease HslVU, ATPase component
    SEED: ATP-dependent hsl protease ATP-binding subunit HslU
    KEGG: ATP-dependent HslUV protease ATP-binding subunit HslU

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1451 conserved exported protein of unknown function no 0.21
    2 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase no 0.19
    3 PP_2511 conserved protein of unknown function no 0.19
    4 PP_2024 Exonuclease SbcC no 0.18
    5 PP_2774 glycine betaine ABC transporter, ATPase/permease fusion protein no 0.18
    6 PP_2864 conserved protein of unknown function no 0.17
    7 PP_2223 conserved protein of unknown function 0.37 0.17
    8 PP_3625 Transporter, LysE family no 0.17
    9 PP_3950 Methyl-accepting chemotaxis transducer no 0.17
    10 PP_3258 conserved protein of unknown function no 0.17
    11 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.54 0.17
    12 PP_3580 conserved protein of unknown function no 0.17
    13 PP_4507 potassium transporter 0.37 0.16
    14 PP_2142 Cell division inhibitor SulA no 0.16
    15 PP_1352 UPF0234 protein PP_1352 no 0.16
    16 PP_0984 conserved membrane protein of unknown function 0.34 0.16
    17 PP_4722 Transcription elongation factor GreA 0.79 0.16
    18 PP_2773 conserved protein of unknown function no 0.16
    19 PP_1276 conserved protein of unknown function no 0.16
    20 PP_2738 putative Transcriptional regulator no 0.15

    Or look for negative cofitness