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  • Top cofit genes for PP_4995 from Pseudomonas putida KT2440

    putative protein possibly involved in the control of exopolysaccharide production
    SEED: UPF0301 protein YqgE
    KEGG: putative transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4032 putative Outer membrane lipoprotein Blc 0.35 0.20
    2 PP_3577 RNA polymerase, sigma 19 factor no 0.19
    3 PP_1504 conserved protein of unknown function no 0.18
    4 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase no 0.17
    5 PP_0386 Sensory box protein no 0.17
    6 PP_2757 putative Sugar-binding protein no 0.17
    7 PP_0208 putative Nitrate ABC transporter, permease protein no 0.16
    8 PP_0216 putative sensory box/GGDEF family protein 0.33 0.16
    9 PP_0976 Ribosomal RNA large subunit methyltransferase F 0.36 0.16
    10 PP_2068 putative Multidrug efflux MFS membrane fusion protein no 0.16
    11 PP_1978 Transcriptional regulator, TetR family no 0.16
    12 PP_3458 Butyrate--CoA ligase 0.14 0.16
    13 PP_2881 Oxidoreductase, short chain dehydrogenase/reductase family no 0.15
    14 PP_0297 L-serine dehydratase no 0.15
    15 PP_2954 conserved protein of unknown function no 0.15
    16 PP_3185 Pet18 protein no 0.15
    17 PP_0021 conserved hypothetical protein 0.66 0.15
    18 PP_2121 putative Lipoprotein no 0.15
    19 PP_1881 conserved protein of unknown function no 0.15
    20 PP_5554 protein of unknown function no 0.14

    Or look for negative cofitness