Top cofit genes for PP_4959 from Pseudomonas putida KT2440

diguanylate cyclase
SEED: Sensory box/GGDEF family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3761		Sensor histidine kinase/response regulator	0.77	0.87
2	PP_4363		Sensor histidine kinase/response regulator	0.67	0.57
3	PP_0166		HlyD family secretion protein	0.52	0.47
4	PP_0168		putative surface adhesion protein	no	0.46
5	PP_0167		Toxin secretion ATP-binding protein	0.57	0.46
6	PP_4519		Agglutination protein	0.40	0.45
7	PP_0165		GGDEF domain protein	0.55	0.42
8	PP_0743		conserved protein with NAD(P)-binding Rossmann-fold domain	no	0.41
9	PP_4373		Transcriptional regulator FleQ	0.55	0.41
10	PP_2413		GGDEF family protein	no	0.39
11	PP_0672		Sensory box protein	0.40	0.39
12	PP_5311		putative signal transduction protein	0.41	0.37
13	PP_0355		Response regulator	no	0.30
14	PP_4670		diguanylate cyclase	0.44	0.30
15	PP_5429		protein of unknown function	no	0.29
16	PP_0185		Positive alginate biosynthesis regulatory protein	0.79	0.28
17	PP_2238		putative metallopeptidase	no	0.28
18	PP_0414		Polyamine ABC transporter, permease protein	0.27	0.26
19	PP_4246		Periplasmic binding protein	0.43	0.26
20	PP_0413		Polyamine ABC transporter, permease protein	0.26	0.25

Or look for negative cofitness