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Cofit
Protein
Homologs
Top cofit genes for PP_4956 from
Pseudomonas putida KT2440
putative acyltransferase
SEED: ElaA protein
KEGG: ElaA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4405
Sensory box protein
no
0.20
2
PP
_1853
Transcriptional regulator, LysR family
no
0.18
3
PP
_0672
Sensory box protein
no
0.18
4
PP
_3178
glycerate kinase
0.45
0.17
5
PP
_5060
conserved protein of unknown function
no
0.16
6
PP
_4246
Periplasmic binding protein
0.48
0.16
7
PP
_4217
outer membrane ferripyoverdine receptor FpvA, TonB-dependent
no
0.16
8
PP
_3589
serine:H+ symport permease, threonine-insensitive
0.69
0.15
9
PP
_5429
protein of unknown function
no
0.15
10
PP
_0165
GGDEF domain protein
no
0.15
11
PP
_0352
RNA polymerase sigma-70 factor, ECF subfamily
0.33
0.15
12
PP
_0245
putative transcriptional accessory protein
no
0.15
13
PP
_1494
Response regulator/GGDEF domain protein
0.46
0.15
14
PP
_1280
Probable alginate O-acetylase AlgI
no
0.15
15
PP
_1687
conserved exported protein of unknown function
no
0.15
16
PP
_4013
MutT/nudix family protein
0.47
0.14
17
PP
_0818
conserved protein of unknown function
no
0.14
18
PP
_4132
conserved protein of unknown function
no
0.14
19
PP
_0167
Toxin secretion ATP-binding protein
0.27
0.14
20
PP
_4519
Agglutination protein
0.25
0.14
Or look for
negative cofitness