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  • Top cofit genes for PP_4948 from Pseudomonas putida KT2440

    Acyl-CoA dehydrogenase family protein
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)
    KEGG: butyryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3925 conserved protein of unknown function 0.59 0.68
    2 PP_2436 Transcriptional regulator, LysR family 0.30 0.68
    3 PP_0767 Transcriptional regulator, LuxR family no 0.45
    4 PP_1941 conserved protein of unknown function no 0.43
    5 PP_3923 Phosphoglycerate mutase no 0.39
    6 PP_4164 Alpha/beta hydrolase no 0.39
    7 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.71 0.38
    8 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.70 0.37
    9 PP_4817 MaoC domain protein no 0.37
    10 PP_0370 Acyl-CoA dehydrogenase family protein no 0.36
    11 PP_0997 Sigma-54 dependent transcriptional regulator/sensory box protein no 0.35
    12 PP_3474 putative Curli fiber protein CsgE no 0.35
    13 PP_5109 membrane component of the ABC transporter FtsEX involved in cellular division 0.41 0.33
    14 PP_0988 glycine dehydrogenase 0.47 0.32
    15 PP_0765 putative adhesin (DUF1302) (from data) 0.16 0.32
    16 PP_2018 adhesin-associated BNR repeat protein (from data) 0.33 0.31
    17 PP_5057 Peptidase, M23/M37 family no 0.31
    18 PP_2818 Multidrug efflux RND transporter MexD no 0.30
    19 PP_1386 Probable efflux pump periplasmic linker TtgA no 0.30
    20 PP_3300 Transcriptional regulator, tetR family no 0.29

    Or look for negative cofitness