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  • Top cofit genes for PP_4938 from Pseudomonas putida KT2440

    putative Glycosyl transferase
    SEED: Glycosyl transferase in large core OS assembly cluster

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4936 O-antigen polymerase 0.92 0.95
    2 PP_1780 putative mannosyltransferase no 0.86
    3 PP_1801 Glycosyl transferase WbpY 0.65 0.86
    4 PP_1805 Polysaccharide biosynthesis protein 0.85 0.86
    5 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.68 0.86
    6 PP_1802 glycosyl transferase no 0.86
    7 PP_1799 GDP-mannose 4,6-dehydratase 0.66 0.85
    8 PP_1804 Glycosyl transferase WbpL 0.54 0.85
    9 PP_1800 Oxidoreductase Rmd 0.26 0.85
    10 PP_1777 phosphomannomutase no 0.81
    11 PP_1803 UDP-sugar epimerase 0.61 0.78
    12 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein 0.49 0.69
    13 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.30 0.65
    14 PP_2148 transcription-repair coupling factor no 0.60
    15 PP_1627 conserved protein of unknown function 0.53 0.57
    16 PP_3627 conserved protein of unknown function no 0.57
    17 PP_0540 conserved inner membrane protein 0.43 0.56
    18 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.56
    19 PP_5283 periplasmic dipeptide transport protein no 0.55
    20 PP_1798 Outer membrane efflux protein no 0.55

    Or look for negative cofitness