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  • Top cofit genes for PP_4936 from Pseudomonas putida KT2440

    O-antigen polymerase
    SEED: lipopolysaccharide core biosynthesis protein, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4938 putative Glycosyl transferase 0.92 0.95
    2 PP_1804 Glycosyl transferase WbpL 0.67 0.83
    3 PP_1805 Polysaccharide biosynthesis protein 0.83 0.83
    4 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase 0.67 0.83
    5 PP_1780 putative mannosyltransferase no 0.83
    6 PP_1801 Glycosyl transferase WbpY 0.68 0.83
    7 PP_1799 GDP-mannose 4,6-dehydratase 0.63 0.82
    8 PP_1802 glycosyl transferase 0.63 0.82
    9 PP_1800 Oxidoreductase Rmd 0.31 0.81
    10 PP_1777 phosphomannomutase no 0.81
    11 PP_1803 UDP-sugar epimerase 0.79 0.76
    12 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein 0.68 0.71
    13 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.65 0.68
    14 PP_2148 transcription-repair coupling factor 0.25 0.62
    15 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.66 0.59
    16 PP_1627 conserved protein of unknown function 0.25 0.58
    17 PP_0540 conserved inner membrane protein 0.70 0.58
    18 PP_5283 periplasmic dipeptide transport protein 0.51 0.58
    19 PP_0405 conserved protein of unknown function 0.64 0.57
    20 PP_3627 conserved protein of unknown function no 0.57

    Or look for negative cofitness