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  • Top cofit genes for PP_4913 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Transporter
    KEGG: aspartyl protease family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3001 CAIB/BAIF family protein no 0.18
    2 PP_2025 Exonuclease SbcD 0.34 0.17
    3 PP_4619 Maleylacetoacetate isomerase no 0.17
    4 PP_3088 conserved protein of unknown function no 0.17
    5 PP_5537 conserved membrane protein of unknown function no 0.17
    6 PP_5527 phage transcriptional regulator no 0.16
    7 PP_0385 putative serine acetyltransferase no 0.16
    8 PP_2368 2,5-diketo-D-gluconate reductase no 0.16
    9 PP_2663 conserved protein of unknown function no 0.16
    10 PP_0566 translation-related factor no 0.15
    11 PP_1987 Methlytransferase, UbiE/COQ5 family 0.35 0.15
    12 PP_0484 transporter of an unknown substrate 0.35 0.15
    13 PP_2937 putative Integrase no 0.15
    14 PP_1120 conserved protein of unknown function no 0.15
    15 PP_4804 RlpA-like lipoprotein 0.29 0.15
    16 PP_5113 predicted Zn-dependent peptidases no 0.15
    17 PP_1145 RNA polymerase-associated protein RapA 0.71 0.15
    18 PP_0086 conserved protein of unknown function no 0.15
    19 PP_3583 multidrug efflux transport system - membrane subunit no 0.15
    20 PP_0552 2,3-butanediol dehydrogenase no 0.15

    Or look for negative cofitness