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  • Top cofit genes for PP_4897 from Pseudomonas putida KT2440

    N-acetylmuramoyl-L-alanine amidase
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
    KEGG: N-acetylmuramoyl-L-alanine amidase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0506 putative ABC efflux transporter, permease protein 0.28 0.34
    2 PP_2714 Sensor histidine kinase no 0.30
    3 PP_3376 putative phosphonate dehydrogenase no 0.30
    4 PP_2098 D-alanyl-D-alanine carboxypeptidase 0.55 0.29
    5 PP_5057 Peptidase, M23/M37 family 0.70 0.28
    6 PP_2348 Sensor histidine kinase no 0.28
    7 PP_5200 proline aminopeptidase P II 0.88 0.27
    8 PP_4922 Phosphomethylpyrimidine synthase 0.84 0.27
    9 PP_3790 diaminopimelate epimerase no 0.27
    10 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase 0.40 0.26
    11 PP_0507 putative ABC efflux transporter, ATP-binding protein 0.29 0.25
    12 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.26 0.25
    13 PP_4882 Iron ABC transporter, permease protein no 0.25
    14 PP_0910 conserved exported protein of unknown function no 0.24
    15 PP_5104 thiazole synthase 0.82 0.24
    16 PP_3244 Magnesium transporter, MgtC family no 0.24
    17 PP_1110 serine acetyltransferase no 0.24
    18 PP_3786 aminotransferase no 0.24
    19 PP_1274 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.23
    20 PP_3788 putative Non-ribosomal peptide synthetase no 0.23

    Or look for negative cofitness