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  • Top cofit genes for PP_4895 from Pseudomonas putida KT2440

    tRNA dimethylallyltransferase
    SEED: tRNA dimethylallyltransferase (EC 2.5.1.75)
    KEGG: tRNA dimethylallyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.64 0.54
    2 PP_4896 DNA mismatch repair protein MutL 0.76 0.52
    3 PP_4560 putative Ribonuclease BN 0.36 0.49
    4 PP_4804 RlpA-like lipoprotein no 0.48
    5 PP_4171 conserved exported protein of unknown function 0.35 0.48
    6 PP_0856 conserved lipoprotein of unknown function 0.66 0.47
    7 PP_4874 50S ribosomal protein L9 0.58 0.45
    8 PP_0725 conserved hypothetical TPR repeat protein 0.48 0.45
    9 PP_4693 RNA polymerase-binding transcription factor DksA 0.69 0.44
    10 PP_1783 dTDP-glucose pyrophosphorylase 0.72 0.44
    11 PP_3831 conserved protein of unknown function no 0.44
    12 PP_4902 Oligoribonuclease 0.80 0.43
    13 PP_0833 queuine tRNA-ribosyltransferase 0.85 0.43
    14 PP_5058 Carboxy-terminal-processing protease 0.48 0.43
    15 PP_4964 D-erythrose 4-phosphate dehydrogenase 0.62 0.42
    16 PP_5706 Sec translocation complex - SecG subunit no 0.42
    17 PP_1650 Sensor protein GacS 0.82 0.40
    18 PP_1734 Probable septum site-determining protein MinC 0.69 0.40
    19 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.60 0.40
    20 PP_5310 junction-specific ATP-dependent DNA helicase 0.98 0.39

    Or look for negative cofitness