Top cofit genes for PP_4874 from Pseudomonas putida KT2440

50S ribosomal protein L9
SEED: LSU ribosomal protein L9p
KEGG: large subunit ribosomal protein L9

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2148		transcription-repair coupling factor	0.31	0.53
2	PP_4171		conserved exported protein of unknown function	0.59	0.52
3	PP_0725		conserved hypothetical TPR repeat protein	0.73	0.49
4	PP_5114		putative adenine methyltransferase	no	0.49
5	PP_5283		periplasmic dipeptide transport protein	0.63	0.48
6	PP_5279		conserved protein of unknown function	0.31	0.48
7	PP_1627		conserved protein of unknown function	no	0.48
8	PP_0789		N-acetyl-anhydromuramyl-L-alanine-amidase	0.40	0.47
9	PP_0540		conserved inner membrane protein	no	0.47
10	PP_1650		Sensor protein GacS	0.34	0.47
11	PP_1626		DNA mismatch repair protein MutS	0.80	0.47
12	PP_1777		phosphomannomutase	no	0.46
13	PP_4099		two-componenent system BarA/UvrY - regulatory subunit	0.32	0.46
14	PP_1803		UDP-sugar epimerase	no	0.46
15	PP_1798		Outer membrane efflux protein	no	0.46
16	PP_3627		conserved protein of unknown function	no	0.45
17	PP_0719		ribosome-associated potassium-dependent informational ATP/GTPase	0.91	0.45
18	PP_4895		tRNA dimethylallyltransferase	0.31	0.45
19	PP_0066		Ribosomal RNA small subunit methyltransferase B	0.60	0.45
20	PP_5058		Carboxy-terminal-processing protease	0.86	0.44

Or look for negative cofitness