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  • Top cofit genes for PP_4872 from Pseudomonas putida KT2440

    putative enzyme of unknown function
    SEED: Fe-S OXIDOREDUCTASE (1.8.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5283 periplasmic dipeptide transport protein no 0.54
    2 PP_1627 conserved protein of unknown function 0.28 0.53
    3 PP_1798 Outer membrane efflux protein no 0.51
    4 PP_3627 conserved protein of unknown function no 0.51
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.38 0.51
    6 PP_2148 transcription-repair coupling factor 0.46 0.50
    7 PP_1777 phosphomannomutase no 0.50
    8 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.55 0.49
    9 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.48
    10 PP_0540 conserved inner membrane protein 0.32 0.47
    11 PP_4720 putative RNA binding protein 0.38 0.46
    12 PP_5439 conserved protein of unknown function no 0.46
    13 PP_1797 HlyD family secretion protein no 0.46
    14 PP_1774 conserved exported protein of unknown function no 0.46
    15 PP_1803 UDP-sugar epimerase 0.45 0.46
    16 PP_0941 putative ribosome associated protein 0.27 0.45
    17 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.44
    18 PP_5279 conserved protein of unknown function 0.37 0.44
    19 PP_4726 Chaperone protein DnaJ no 0.44
    20 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.64 0.44

    Or look for negative cofitness