Top cofit genes for PP_4864 from Pseudomonas putida KT2440

High-affinity branched-chain amino acid transport ATP-binding protein BraF
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 PP_4863 high-affinity branched-chain amino acid transporter, ATP-binding 0.87 0.77
2 PP_4866 High-affinity branched-chain amino acid transport system permease protein BraD 0.92 0.76
3 PP_4865 High-affinity branched-chain amino acid transport system permease protein BraE 0.93 0.74
4 PP_4867 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) 0.93 0.63
5 PP_1139 branched chain amino acid transporter - permease subunit 0.89 0.53
6 PP_1140 branched chain amino acid transporter - permease subunit 0.55 0.52
7 PP_1137 high-affinity branched-chain amino acid transporter, ATP binding 0.55 0.49
8 PP_1141 branched-chain amino acids ABC transporter - periplasmic leucine binding subunit 0.48 0.46
9 PP_1138 branched chain amino acid transporter - ATP binding subunit 0.51 0.44
10 PP_2868 Transcriptional regulator, Cro/CI family no 0.27
11 PP_1298 putative amino acid ABC transporter - permease subunit 0.80 0.24
12 PP_4403 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex 0.55 0.23
13 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.28 0.23
14 PP_0881 dipeptide ABC transporter - putative membrane subunit no 0.23
15 PP_4695 Sensory box histidine kinase 0.45 0.23
16 PP_0879 dipeptide ABC transporter - putative ATP binding subunit 0.22 0.23
17 PP_4179 Chaperone protein HtpG 0.43 0.22
18 PP_1297 putative amino-acid ABC transporter-binding protein YhdW 0.68 0.22
19 PP_5047 two-component system sensory histidine kinase/phosphatase GlnL/GlnG 0.59 0.21
20 PP_2080 NAD-specific glutamate dehydrogenase 0.41 0.21

Or look for negative cofitness