Top cofit genes for PP_4859 from Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0624		Uncharacterized protein YfiH	0.77	0.39
2	PP_4722		Transcription elongation factor GreA	0.64	0.38
3	PP_0058		putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	0.45	0.37
4	PP_1320		stringent starvation protein A	0.56	0.36
5	PP_3957		choline/carnitine/betaine transporter BetTC	no	0.36
6	PP_0345		putative Heptose kinase WapP	no	0.35
7	PP_2852		putative Sulfatase domain protein	no	0.34
8	PP_4860		putative Mannose-6-phosphate isomerase	0.28	0.32
9	PP_5064		choline dehydrogenase	no	0.31
10	PP_1786		putative Glycosyl transferase	no	0.30
11	PP_1099		Cold shock protein CapB	0.43	0.30
12	PP_0697		ribosomal-protein-S18-alanine N-acetyltransferase	0.70	0.30
13	PP_4653		adenine:H+ symporter	0.38	0.29
14	PP_1369		conserved protein of unknown function	0.81	0.29
15	PP_1191		S4 domain protein	no	0.29
16	PP_1795		conserved protein of unknown function	no	0.29
17	PP_0439		conserved protein of unknown function	0.20	0.28
18	PP_1226		pre-queuosine 0 synthase	0.38	0.28
19	PP_1324		putative endonuclease distantly related to archaeal Holliday junction resolvase	0.47	0.28
20	PP_4900		epoxyqueuosine reductase	no	0.28

Or look for negative cofitness