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  • Top cofit genes for PP_4845 from Pseudomonas putida KT2440

    putative Urea ABC transporter, ATP-binding protein
    SEED: Urea ABC transporter, ATPase protein UrtE
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3175 putative Dioxygenase, ferredoxin reductase component no 0.19
    2 PP_3245 conserved protein of unknown function no 0.19
    3 PP_2054 putative DNA-binding transcriptional regulator 0.35 0.18
    4 PP_0328 formaldehyde dehydrogenase no 0.17
    5 PP_3371 Sensor histidine kinase no 0.17
    6 PP_5037 lipocalin family lipoprotein no 0.17
    7 PP_1253 Transcriptional regulator, ArsR family 0.13 0.17
    8 PP_1446 TonB-dependent receptor 0.25 0.17
    9 PP_2714 Sensor histidine kinase 0.36 0.16
    10 PP_4861 conserved protein of unknown function no 0.16
    11 PP_5261 Transcriptional regulator, LysR family 0.22 0.16
    12 PP_4570 conserved protein of unknown function no 0.16
    13 PP_2776 Homocysteine S-methyltransferase family protein no 0.16
    14 PP_0886 conserved exported protein of unknown function 0.21 0.16
    15 PP_4647 transcriptional regulator, LuxR family no 0.15
    16 PP_5376 conserved exported protein of unknown function no 0.15
    17 PP_1838 conserved membrane protein of unknown function no 0.15
    18 PP_5516 protein of unknown function no 0.15
    19 PP_3997 putative Glycosyl transferase no 0.15
    20 PP_3167 benzoate transport protein no 0.15

    Or look for negative cofitness