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  • Top cofit genes for PP_4841 from Pseudomonas putida KT2440

    putative Urea ABC transporter, periplasmic protein
    KEGG: branched-chain amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1072 Leucine-rich repeat domain protein 0.25 0.29
    2 PP_3950 Methyl-accepting chemotaxis transducer no 0.25
    3 PP_5136 ABC transporter, permease protein no 0.24
    4 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.32 0.22
    5 PP_2072 Transcriptional regulator, AraC family no 0.22
    6 PP_3360 conserved membrane protein of unknown function no 0.22
    7 PP_5424 conserved protein of unknown function no 0.21
    8 PP_0570 lipoprotein of unknown function 0.53 0.21
    9 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase 0.24 0.20
    10 PP_5048 two-component system DNA-binding transcriptional dual regulator GlnL/GlnG 0.30 0.20
    11 PP_4152 conserved protein of unknown function no 0.20
    12 PP_0227 periplasmic cystine-binding protein no 0.20
    13 PP_2025 Exonuclease SbcD no 0.20
    14 PP_0866 putative Transmembrane sensor 0.38 0.20
    15 PP_0584 Methyl-accepting chemotaxis transducer no 0.20
    16 PP_2593 Ferric siderophore ABC transporter, permease protein no 0.20
    17 PP_4585 RNA methyltransferase, TrmH family no 0.20
    18 PP_4234 Aldehyde oxidase and xanthine dehydrogenase no 0.19
    19 PP_0090 conserved exported protein of unknown function no 0.19
    20 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.17 0.19

    Or look for negative cofitness