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  • Top cofit genes for PP_4825 from Pseudomonas putida KT2440

    Membrane protein, MarC family
    SEED: membrane protein, MarC family
    KEGG: multiple antibiotic resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2988 Alcohol dehydrogenase, zinc-containing 0.21 0.19
    2 PP_0570 lipoprotein of unknown function no 0.19
    3 PP_3955 permease no 0.18
    4 PP_2430 Transcriptional regulator, AraC family no 0.17
    5 PP_3557 Methyl-accepting chemotaxis transducer 0.62 0.17
    6 PP_0572 peptidoglycan glycosyltransferase 0.41 0.17
    7 PP_1166 putative permease of the drug/metabolite transporter (DMT) superfamily no 0.16
    8 PP_4085 putative RHS family protein 0.59 0.16
    9 PP_1282 Alginate biosynthesis protein AlgX no 0.16
    10 PP_5SB 5S ribosomal RNA no 0.15
    11 PP_1051 Type II secretion pathway protein XcpV no 0.15
    12 PP_0089 stress-induced peroxiredoxin, lipoyl-dependent peroxidase no 0.15
    13 PP_5037 lipocalin family lipoprotein no 0.15
    14 PP_2390 Transcriptional regulator, LysR family no 0.15
    15 PP_2603 conserved protein of unknown function no 0.15
    16 PP_5639 conserved exported protein of unknown function no 0.15
    17 PP_0328 formaldehyde dehydrogenase no 0.15
    18 PP_4529 conserved protein of unknown function no 0.15
    19 PP_5242 Sensor histidine kinase/GAF domain protein no 0.15
    20 PP_2776 Homocysteine S-methyltransferase family protein no 0.15

    Or look for negative cofitness