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  • Top cofit genes for PP_4824 from Pseudomonas putida KT2440

    Sensor histidine kinase/response regulator
    SEED: Sensor histidine kinase/response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4124 NADH-quinone oxidoreductase subunit G 0.67 0.51
    2 PP_4131 NADH-quinone oxidoreductase subunit N 0.68 0.51
    3 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.50
    4 PP_5236 conserved protein of unknown function no 0.49
    5 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.66 0.49
    6 PP_4546 ATP-dependent helicase HrpA no 0.47
    7 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.60 0.47
    8 PP_5028 proline iminopeptidase no 0.47
    9 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.64 0.46
    10 PP_4120 NADH-quinone oxidoreductase subunit B 0.69 0.45
    11 PP_5025 Glucans biosynthesis glucosyltransferase H 0.67 0.44
    12 PP_5026 Glucans biosynthesis protein G no 0.43
    13 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M 0.68 0.43
    14 PP_3555 putative Transmembrane sensor 0.33 0.42
    15 PP_5311 putative signal transduction protein 0.63 0.41
    16 PP_0065 NAD-binding component of TrK potassium transporter 0.76 0.41
    17 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.40
    18 PP_5294 Ribonuclease PH 0.76 0.40
    19 PP_0938 conserved protein of unknown function 0.55 0.39
    20 PP_2378 Fe/S biogenesis protein NfuA 0.48 0.37

    Or look for negative cofitness