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  • Top cofit genes for PP_4787 from Pseudomonas putida KT2440

    putative protein with nucleoside triphosphate hydrolase domain
    SEED: Phosphate starvation-inducible protein PhoH, predicted ATPase
    KEGG: phosphate starvation-inducible protein PhoH and related proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4710 tRNA pseudouridine 55 synthase 0.83 0.44
    2 PP_0247 Osmolarity sensor protein EnvZ no 0.36
    3 PP_1226 pre-queuosine 0 synthase 0.63 0.33
    4 PP_1917 4-amino-4-deoxychorismate lyase no 0.32
    5 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.29 0.31
    6 PP_0624 Uncharacterized protein YfiH 0.36 0.31
    7 PP_4546 ATP-dependent helicase HrpA 0.61 0.31
    8 PP_4722 Transcription elongation factor GreA 0.83 0.29
    9 PP_1321 ClpXP protease specificity-enhancing factor no 0.28
    10 PP_4939 conserved protein of unknown function no 0.28
    11 PP_5028 proline iminopeptidase 0.67 0.28
    12 PP_5350 Transcriptional regulator, RpiR family 0.48 0.28
    13 PP_1786 putative Glycosyl transferase no 0.28
    14 PP_4653 adenine:H+ symporter no 0.27
    15 PP_2223 conserved protein of unknown function 0.31 0.27
    16 PP_1994 tRNA pseudouridine (38-40)synthase 0.74 0.27
    17 PP_1189 conserved hypothetical protein no 0.27
    18 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.50 0.26
    19 PP_2852 putative Sulfatase domain protein no 0.26
    20 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.86 0.26

    Or look for negative cofitness