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Cofit
Protein
Homologs
Top cofit genes for PP_4781 from
Pseudomonas putida KT2440
Sensor histidine kinase
SEED: Sensor histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1798
Outer membrane efflux protein
no
0.36
2
PP
_1627
conserved protein of unknown function
no
0.36
3
PP
_0066
Ribosomal RNA small subunit methyltransferase B
no
0.34
4
PP
_1797
HlyD family secretion protein
no
0.34
5
PP
_1655
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
no
0.34
6
PP
_0351
putative Transmembrane sensor protein
no
0.34
7
PP
_4217
outer membrane ferripyoverdine receptor FpvA, TonB-dependent
no
0.33
8
PP
_t49
tRNA-Met
no
0.32
9
PP
_3627
conserved protein of unknown function
no
0.31
10
PP
_0540
conserved inner membrane protein
0.71
0.30
11
PP
_1279
Probable alginate O-acetylase AlgJ
no
0.30
12
PP
_1523
conserved protein of unknown function
0.57
0.30
13
PP
_1280
Probable alginate O-acetylase AlgI
no
0.29
14
PP
_1075
glycerol kinase
0.39
0.29
15
PP
_4495
aromatic amino acid transport protein
no
0.29
16
PP
_1789
Hydrolase, haloacid dehalogenase-like family
no
0.28
17
PP
_1774
conserved exported protein of unknown function
no
0.28
18
PP
_4971
putative Outer membrane-bound lytic murein transglycolase A
no
0.27
19
PP
_5283
periplasmic dipeptide transport protein
no
0.26
20
PP
_3769
conserved exported protein of unknown function
no
0.26
Or look for
negative cofitness