Top cofit genes for PP_4778 from Pseudomonas putida KT2440

23S rRNA pseudouridine 2457 synthase
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5135		ABC transporter, periplasmic binding protein	no	0.16
2	PP_3318		conserved protein of unknown function	no	0.16
3	PP_2026		conserved protein of unknown function	no	0.16
4	PP_2360		putative type 1 pili subunit CsuA/B protein	no	0.16
5	PP_4057		conserved membrane protein of unknown function with autotransporter beta-domain	no	0.15
6	PP_5202		putative cell division protein	0.17	0.15
7	PP_3098		conserved protein of unknown function	no	0.15
8	PP_2376		Esterified fatty acid cis/trans isomerase	no	0.15
9	PP_2738		putative Transcriptional regulator	no	0.14
10	PP_2029		von Willebrand factor type A domain protein	0.26	0.14
11	PP_4952		ATP-dependent RNA helicase, specific for 23S rRNA	0.53	0.14
12	PP_5262		Probable multidrug resistance protein NorM	no	0.14
13	PP_2098		D-alanyl-D-alanine carboxypeptidase	0.30	0.14
14	PP_4771		conserved membrane protein of unknown function	no	0.14
15	PP_0408		conserved exported protein of unknown function	no	0.14
16	PP_2650		putative 4-hydroxybutyrate dehydrogenase	no	0.13
17	PP_1797		HlyD family secretion protein	no	0.13
18	PP_0249		conserved protein of unknown function	no	0.13
19	PP_3050		conserved protein of unknown function	no	0.13
20	PP_4971		putative Outer membrane-bound lytic murein transglycolase A	no	0.13

Or look for negative cofitness