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  • Top cofit genes for PP_4768 from Pseudomonas putida KT2440

    Exonuclease
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: DNA polymerase III subunit epsilon

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3175 putative Dioxygenase, ferredoxin reductase component no 0.23
    2 PP_2880 Transcriptional regulator, TetR family no 0.17
    3 PP_1631 conserved protein of unknown function no 0.16
    4 PP_2232 XRE family transcriptional regulator no 0.16
    5 PP_2996 conserved protein of unknown function no 0.15
    6 PP_3086 putative RNA polymerase sigma-70 factor no 0.15
    7 PP_1925 putative Monooxygenase no 0.14
    8 PP_1739 conserved membrane protein of unknown function no 0.14
    9 PP_2306 conserved exported protein of unknown function 0.32 0.14
    10 PP_2758 putative Ribose ABC transporter, periplasmic ribose-binding protein no 0.14
    11 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase no 0.14
    12 PP_1722 ABC transporter, ATP-binding protein no 0.14
    13 PP_3020 putative Serine/threonine protein phosphatase no 0.14
    14 PP_4982 putative cytochrome b561, iron-regulated no 0.14
    15 PP_0740 Transcriptional regulator, MerR family no 0.14
    16 PP_0643 protein of unknown function no 0.14
    17 PP_2054 putative DNA-binding transcriptional regulator no 0.13
    18 PP_2248 putative transporter no 0.13
    19 PP_0350 Outer membrane ferrichrome-iron receptor no 0.13
    20 PP_5603 putative FAD dependent oxidoreductase no 0.13

    Or look for negative cofitness