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  • Top cofit genes for PP_4767 from Pseudomonas putida KT2440

    amino acid exporter for phenylalanine, threonine
    SEED: Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4197 Transcriptional regulator, GntR family 0.49 0.57
    2 PP_3527 Transcriptional regulator, TetR family 0.46 0.41
    3 PP_1416 putative Tricarboxylate transport protein TctA 0.38 0.39
    4 PP_1417 putative Tricarboxylate transport protein TctB no 0.35
    5 PP_0358 conserved membrane protein of unknown function 0.61 0.30
    6 PP_3080 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.58 0.27
    7 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.33 0.22
    8 PP_1419 tricarboxylate-specific outer membrane porin 0.29 0.21
    9 PP_2868 Transcriptional regulator, Cro/CI family no 0.21
    10 PP_4685 conserved protein of unknown function no 0.20
    11 PP_1418 putative Tricarboxylate transport protein TctC 0.39 0.19
    12 PP_0223 Monooxygenase, DszC family 0.52 0.18
    13 PP_5086 putative nuclease (SNase domain protein) no 0.18
    14 PP_4854 Lipase no 0.17
    15 PP_1421 putative Sensor histidine kinase TctE 0.43 0.17
    16 PP_1420 Transcriptional regulatory protein tctD 0.37 0.17
    17 PP_1142 conserved protein of unknown function no 0.16
    18 PP_4922 Phosphomethylpyrimidine synthase 0.54 0.16
    19 PP_1792 Glycosyl transferase, group 2 family protein no 0.16
    20 PP_0889 conserved exported protein of unknown function no 0.15

    Or look for negative cofitness