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  • Top cofit genes for PP_4766 from Pseudomonas putida KT2440

    ATP-dependent RNA helicase
    SEED: ATP-dependent RNA helicase PA3950

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0872 Peptide chain release factor 3 0.47 0.55
    2 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.57 0.42
    3 PP_4517 conserved protein of unknown function 0.45 0.39
    4 PP_4936 O-antigen polymerase 0.24 0.37
    5 PP_1702 Recombination-associated protein RdgC 0.25 0.37
    6 PP_0758 conserved protein of unknown function 0.54 0.36
    7 PP_3893 putative Phage DNA helicase no 0.34
    8 PP_4938 putative Glycosyl transferase no 0.34
    9 PP_5400 conserved protein of unknown function no 0.34
    10 PP_0941 putative ribosome associated protein 0.55 0.33
    11 PP_4880 exoribonuclease R 0.66 0.32
    12 PP_5279 conserved protein of unknown function 0.27 0.32
    13 PP_2148 transcription-repair coupling factor 0.39 0.31
    14 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.55 0.31
    15 PP_4720 putative RNA binding protein 0.32 0.31
    16 PP_1777 phosphomannomutase no 0.31
    17 PP_5283 periplasmic dipeptide transport protein 0.34 0.30
    18 PP_4980 ATP-dependent RNA helicase 0.26 0.30
    19 PP_2437 putative Acyl-CoA dehydrogenase no 0.30
    20 PP_4875 conserved membrane protein of unknown function 0.38 0.30

    Or look for negative cofitness