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  • Top cofit genes for PP_4752 from Pseudomonas putida KT2440

    putative Xaa-Pro aminopeptidase
    SEED: Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.22
    2 PP_2496 conserved protein of unknown function no 0.21
    3 PP_2652 putative Hydratase/decarboxylase no 0.20
    4 PP_2714 Sensor histidine kinase no 0.20
    5 PP_1301 quality control serine endoprotease DegS 0.33 0.19
    6 PP_0506 putative ABC efflux transporter, permease protein no 0.19
    7 PP_5733 putative metal-binding protein no 0.19
    8 PP_3376 putative phosphonate dehydrogenase no 0.18
    9 PP_4652 putative Membrane protein no 0.18
    10 PP_2916 riboflavin synthase no 0.18
    11 PP_5070 ParA family protein no 0.17
    12 PP_2849 urease accessory protein no 0.17
    13 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB no 0.17
    14 PP_1253 Transcriptional regulator, ArsR family no 0.17
    15 PP_1020 putative glucose-6-phosphate 1-epimerase no 0.16
    16 PP_3431 ThiJ/PfpI family protein no 0.16
    17 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.16
    18 PP_3095 Protein ClpV1 no 0.16
    19 PP_3718 putative aminotransferase no 0.16
    20 PP_0662 putative Threonine synthase no 0.16

    Or look for negative cofitness