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  • Top cofit genes for PP_4750 from Pseudomonas putida KT2440

    Amino acid ABC transporter, permease protein
    SEED: amino acid ABC transporter, permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4391 flagellar basal-body rod protein FlgB no 0.18
    2 PP_4359 Flagellar protein FliL no 0.17
    3 PP_4365 Flagellar protein FliJ no 0.17
    4 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons no 0.17
    5 PP_4383 Flagellar P-ring protein no 0.17
    6 PP_4356 Flagellar protein FliO no 0.17
    7 PP_5395 conserved protein of unknown function no 0.17
    8 PP_4371 two component system AtoC DNA-binding transcriptional activator no 0.16
    9 PP_4386 flagellar basal-body rod protein FlgF no 0.16
    10 PP_4389 Flagellar basal-body rod modification protein FlgD no 0.16
    11 PP_5009 conserved protein of unknown function no 0.16
    12 PP_4388 Flagellar hook protein FlgE no 0.16
    13 PP_4352 flagellin export apparatus, substrate specificity protein no 0.16
    14 PP_5127 ribosomal RNA large subunit methyltransferase I no 0.16
    15 PP_1087 Outer membrane protein, OmpA family no 0.15
    16 PP_4355 flagellar export apparatus subunit no 0.15
    17 PP_4361 Flagellar hook-length control protein FliK no 0.15
    18 PP_4353 Flagellar biosynthetic protein fliR no 0.15
    19 PP_4955 conserved exported protein of unknown function no 0.15
    20 PP_3862 putative Phage assembly protein no 0.15

    Or look for negative cofitness