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  • Top cofit genes for PP_4729 from Pseudomonas putida KT2440

    factor used in recombination and DNA repair
    SEED: DNA repair protein RecN
    KEGG: DNA repair protein RecN (Recombination protein N)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4754 Transcriptional regulator, TetR family 0.32 0.33
    2 PP_2245 Transcriptional regulator, Cro/CI family no 0.32
    3 PP_2430 Transcriptional regulator, AraC family no 0.28
    4 PP_4815 putative Membrane protein 0.33 0.24
    5 PP_4289 conserved membrane protein of unknown function no 0.23
    6 PP_3286 DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) no 0.21
    7 PP_2326 Universal stress protein 0.38 0.21
    8 PP_4893 GTPase HflX no 0.21
    9 PP_2101 DNA-binding response regulator in two-component regulatory system with EvgS no 0.21
    10 PP_4947 proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase no 0.21
    11 PP_4993 Glutathione synthetase 0.62 0.19
    12 PP_1364 conserved exported protein of unknown function no 0.19
    13 PP_0118 zinc import ATP-binding protein no 0.18
    14 PP_2889 putative Transmembrane regulator PrtR no 0.18
    15 PP_0510 Thioredoxin 0.34 0.18
    16 PP_4197 Transcriptional regulator, GntR family 0.38 0.18
    17 PP_4900 epoxyqueuosine reductase 0.65 0.17
    18 PP_2429 putative Membrane protein no 0.17
    19 PP_4235 thiol/disulfide interchange protein 2 no 0.17
    20 PP_4776 AsnC family transcriptional regulator no 0.16

    Or look for negative cofitness