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  • Top cofit genes for PP_4726 from Pseudomonas putida KT2440

    Chaperone protein DnaJ
    SEED: Chaperone protein DnaJ
    KEGG: molecular chaperone DnaJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.72 0.59
    2 PP_2148 transcription-repair coupling factor 0.74 0.59
    3 PP_5283 periplasmic dipeptide transport protein 0.43 0.58
    4 PP_1777 phosphomannomutase no 0.56
    5 PP_0405 conserved protein of unknown function 0.80 0.55
    6 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein 0.93 0.55
    7 PP_1355 Muropeptide permease AmpG 0.82 0.54
    8 PP_1036 membrane-bound lytic murein transglycosylase F no 0.54
    9 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.94 0.54
    10 PP_2145 beta-N-acetylglucosaminidase 0.78 0.51
    11 PP_2027 conserved exported protein of unknown function no 0.50
    12 PP_1627 conserved protein of unknown function no 0.50
    13 PP_5279 conserved protein of unknown function no 0.50
    14 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.62 0.50
    15 PP_4936 O-antigen polymerase no 0.49
    16 PP_3627 conserved protein of unknown function no 0.49
    17 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.50 0.49
    18 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.83 0.48
    19 PP_3769 conserved exported protein of unknown function no 0.48
    20 PP_1871 Protease HtpX 0.92 0.47

    Or look for negative cofitness