• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_4710 from Pseudomonas putida KT2440

    tRNA pseudouridine 55 synthase
    SEED: tRNA pseudouridine synthase B (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase B

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.72 0.66
    2 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.91 0.55
    3 PP_4653 adenine:H+ symporter 0.34 0.54
    4 PP_4722 Transcription elongation factor GreA 0.64 0.45
    5 PP_0680 ATP-dependent protease-like protein 0.54 0.44
    6 PP_4787 putative protein with nucleoside triphosphate hydrolase domain 0.83 0.44
    7 PP_0247 Osmolarity sensor protein EnvZ 0.80 0.42
    8 PP_1994 tRNA pseudouridine (38-40)synthase 0.81 0.41
    9 PP_4939 conserved protein of unknown function no 0.41
    10 PP_2223 conserved protein of unknown function no 0.40
    11 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase 0.41 0.38
    12 PP_1321 ClpXP protease specificity-enhancing factor 0.78 0.37
    13 PP_1234 putative permease no 0.37
    14 PP_4900 epoxyqueuosine reductase 0.76 0.36
    15 PP_1320 stringent starvation protein A 0.68 0.36
    16 PP_1917 4-amino-4-deoxychorismate lyase 0.49 0.35
    17 PP_1226 pre-queuosine 0 synthase 0.71 0.35
    18 PP_4676 methionine sulfoxide reductase catalytic subunit no 0.35
    19 PP_3831 conserved protein of unknown function 0.38 0.35
    20 PP_0624 Uncharacterized protein YfiH 0.86 0.34

    Or look for negative cofitness