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  • Top cofit genes for PP_4697 from Pseudomonas putida KT2440

    poly(A) polymerase
    SEED: Poly(A) polymerase (EC 2.7.7.19)
    KEGG: poly(A) polymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4880 exoribonuclease R 0.89 0.45
    2 PP_0872 Peptide chain release factor 3 0.80 0.26
    3 PP_4776 AsnC family transcriptional regulator 0.49 0.25
    4 PP_4980 ATP-dependent RNA helicase no 0.25
    5 PP_4342 flagellar synthesis regulator, putative ATPase 0.66 0.24
    6 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.87 0.24
    7 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.32 0.24
    8 PP_4517 conserved protein of unknown function no 0.24
    9 PP_4006 Putative arginyl-tRNA--protein transferase 0.74 0.23
    10 PP_4902 Oligoribonuclease no 0.23
    11 PP_4993 Glutathione synthetase 0.81 0.23
    12 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.23
    13 PP_4009 ATP-dependent Clp protease adapter protein ClpS 0.75 0.23
    14 PP_4994 conserved protein of unknown function 0.81 0.23
    15 PP_5294 Ribonuclease PH 0.60 0.22
    16 PP_3342 nickel ABC transporter periplasmic binding protein no 0.22
    17 PP_4766 ATP-dependent RNA helicase no 0.22
    18 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor 0.37 0.21
    19 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.63 0.21
    20 PP_1719 Tail-specific protease prc 0.51 0.20

    Or look for negative cofitness