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  • Top cofit genes for PP_4689 from Pseudomonas putida KT2440

    Heme/hemin ABC transporter, periplasmic heme/hemin-binding protein
    SEED: Periplasmic hemin-binding protein
    KEGG: iron complex transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4694 Glutamyl-Q tRNA(Asp) synthetase 0.15 0.20
    2 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.24 0.19
    3 PP_2974 putative sulfatase no 0.18
    4 PP_5144 conserved protein of unknown function 0.69 0.18
    5 PP_4100 Transcriptional regulator, Cro/CI family no 0.17
    6 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase no 0.17
    7 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.16
    8 PP_0099 conserved protein of unknown function 0.27 0.15
    9 PP_2395 Leucine-rich repeat domain protein no 0.15
    10 PP_0708 putative Betaine-aldehyde dehydrogenase no 0.15
    11 PP_4986 Channel protein, hemolysin III family 0.23 0.15
    12 PP_2368 2,5-diketo-D-gluconate reductase 0.66 0.15
    13 PP_1631 conserved protein of unknown function no 0.15
    14 PP_1144 conserved membrane protein of unknown function no 0.14
    15 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.14
    16 PP_1228 Methyl-accepting chemotaxis transducer no 0.14
    17 PP_2068 putative Multidrug efflux MFS membrane fusion protein no 0.14
    18 PP_2435 cysteine desulfurase no 0.14
    19 PP_5424 conserved protein of unknown function no 0.14
    20 PP_4152 conserved protein of unknown function no 0.13

    Or look for negative cofitness