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  • Top cofit genes for PP_4685 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Regulator of competence-specific genes
    KEGG: DNA transformation protein and related proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2326 Universal stress protein 0.22 0.39
    2 PP_3662 conserved protein of unknown function no 0.24
    3 PP_4723 Carbamoyl-phosphate synthase large chain no 0.24
    4 PP_0691 Glutamate 5-kinase no 0.22
    5 PP_4446 putative Group II intron-encoding maturase no 0.21
    6 PP_1301 quality control serine endoprotease DegS no 0.21
    7 PP_4724 Carbamoyl-phosphate synthase small chain no 0.21
    8 PP_5104 thiazole synthase 0.14 0.21
    9 PP_4681 conserved protein of unknown function no 0.21
    10 PP_4421 putative aminotransferase no 0.21
    11 PP_4999 dihydroorotase-like protein no 0.20
    12 PP_4767 amino acid exporter for phenylalanine, threonine 0.15 0.20
    13 PP_1792 Glycosyl transferase, group 2 family protein no 0.20
    14 PP_1233 sulfurtransferase no 0.20
    15 PP_1945 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase no 0.19
    16 PP_4922 Phosphomethylpyrimidine synthase 0.17 0.19
    17 PP_4459 transposase no 0.19
    18 PP_1934 conserved protein of unknown function no 0.19
    19 PP_1940 Methyl-accepting chemotaxis transducer no 0.19
    20 PP_1111 putative Synthetase no 0.19

    Or look for negative cofitness