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  • Top cofit genes for PP_4683 from Pseudomonas putida KT2440

    transglycosylase/transpeptidase
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
    KEGG: penicillin-binding protein 1B

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1224 periplasmic subunit of the TolQRA transport system 0.50 0.36
    2 PP_1430 putative periplasmic serine endoprotease DegP-like 0.70 0.33
    3 PP_2645 magnesium transporter, ATP-dependent 0.34 0.30
    4 PP_1325 putative lipoprotein 0.51 0.30
    5 PP_2646 conserved protein of unknown function no 0.29
    6 PP_2322 Major outer membrane lipoprotein 0.69 0.29
    7 PP_4940 Putative glycosyltransferase no 0.28
    8 PP_4684 conserved protein of unknown function with kinase-like domain no 0.26
    9 PP_4505 Sensor histidine kinase no 0.26
    10 PP_1577 Phage tail tape meausure protein, lambda family no 0.26
    11 PP_0951 Ribosome hibernation promoting factor 0.58 0.26
    12 PP_2348 Sensor histidine kinase no 0.25
    13 PP_1567 Capsid protein no 0.25
    14 PP_1573 putative Major tail protein no 0.24
    15 PP_4286 allantoinase 0.70 0.24
    16 PP_5476 conserved protein of unknown function no 0.24
    17 PP_5090 putative cell division protein no 0.24
    18 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein no 0.24
    19 PP_4004 DNA translocase FtsK 0.44 0.24
    20 PP_0995 conserved membrane protein of unknown function no 0.23

    Or look for negative cofitness