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  • Top cofit genes for PP_4682 from Pseudomonas putida KT2440

    conserved protein of unknown function containing tetratricopeptide repeat domain
    SEED: FOG: TPR repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3451 conserved exported protein of unknown function no 0.32
    2 PP_1049 putative protein secretion protein for export no 0.28
    3 PP_1670 putative Lipoprotein 0.37 0.28
    4 PP_3128 putative Exopolysaccharide biosynthesis/transport protein no 0.27
    5 PP_1734 Probable septum site-determining protein MinC 0.26 0.25
    6 PP_0753 putative Lipoprotein 0.64 0.24
    7 PP_2293 DNA maturase B no 0.24
    8 PP_5109 membrane component of the ABC transporter FtsEX involved in cellular division 0.57 0.24
    9 PP_2971 transposase no 0.24
    10 PP_3719 Putrescine-binding periplasmic protein no 0.23
    11 PP_2808 putative Oxidoreductase no 0.23
    12 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.43 0.23
    13 PP_3189 cytosine deaminase / isoguanine deaminase no 0.23
    14 PP_1028 Transcriptional regulator, LysR family no 0.23
    15 PP_1577 Phage tail tape meausure protein, lambda family no 0.23
    16 PP_1055 Type II secretion pathway protein GspN no 0.22
    17 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.22
    18 PP_4029 NADH pyrophosphatase no 0.22
    19 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.22
    20 PP_4282 Aquaporin Z no 0.21

    Or look for negative cofitness