Top cofit genes for PP_4668 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4667		methylmalonate-semialdehyde dehydrogenase	0.95	0.85
2	PP_3491		Enoly-coenzyme A hydratase/isomerase family protein	0.95	0.82
3	PP_4666		3-hydroxyisobutyrate dehydrogenase	0.94	0.81
4	PP_3492		isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data)	0.89	0.61
5	PP_4404		dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex	0.73	0.60
6	PP_5188		putative transcriptional regulator (AsnC/Lrp family)	0.78	0.59
7	PP_4403		Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex	0.87	0.43
8	PP_4401		branched-chain alpha-keto acid dehydrogenase complex, alpha subunit	0.85	0.42
9	PP_4402		branched-chain alpha-keto acid dehydrogenase complex, beta subunit	0.85	0.41
10	PP_4400		Bkd operon transcriptional regulator	0.80	0.41
11	PP_2335		methylcitrate synthase	0.96	0.39
12	PP_2334		2-methylisocitrate lyase	0.78	0.38
13	PP_3756		TetR family transcriptional regulator	0.39	0.38
14	PP_2868		Transcriptional regulator, Cro/CI family	no	0.37
15	PP_0057		major facilitator family transporter	0.30	0.36
16	PP_0056		choline dehydrogenase	0.79	0.34
17	PP_0055		transcriptional regulator	0.32	0.33
18	PP_2217		enoyl-CoA hydratase	0.76	0.33
19	PP_1127		Carboxylesterase	0.26	0.29
20	PP_3659		transcriptional regulator, AraC family	no	0.26

Or look for negative cofitness