Top cofit genes for PP_4664 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Hydrogen peroxide-inducible genes activator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1435		DNA repair protein RecO	0.22	0.17
2	PP_3405		conserved membrane protein of unknown function	0.42	0.16
3	PP_2423		Fe(2+)/alpha-ketoglutarate-dependent dioxygenase	no	0.16
4	PP_1253		Transcriptional regulator, ArsR family	no	0.16
5	PP_2359		putative Type 1 pili subunit CsuA/B protein	no	0.15
6	PP_4626		holin regulator of murein hydrolases	no	0.15
7	PP_0506		putative ABC efflux transporter, permease protein	no	0.15
8	PP_1028		Transcriptional regulator, LysR family	0.41	0.15
9	PP_4623		conserved protein of unknown function	no	0.14
10	PP_0109		conserved membrane protein of unknown function	0.39	0.14
11	PP_2451		extracellular DNA endonuclease	0.21	0.14
12	PP_2621		conserved protein of unknown function	no	0.14
13	PP_1364		conserved exported protein of unknown function	no	0.14
14	PP_5333		conserved exported protein of unknown function	no	0.14
15	PP_2599		Chemotaxis sensory transducer family protein	0.37	0.14
16	PP_5169		sulfate ABC transporter, inner membrane subunit CysW	0.52	0.14
17	PP_2834		Putative D-galactarate dehydratase/Altronate dehydratase	no	0.14
18	PP_3633		putative ArgC like N-acetyl-gamma-glutamyl-phosphate reductase	0.24	0.13
19	PP_4512		putative permease of the drug/metabolite transporter (DMT) superfamily	no	0.13
20	PP_1981		tRNA-dihydrouridine synthase C	0.35	0.13

Or look for negative cofitness