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  • Top cofit genes for PP_4653 from Pseudomonas putida KT2440

    adenine:H+ symporter
    SEED: Xanthine/uracil/thiamine/ascorbate permease family protein
    KEGG: putative MFS transporter, AGZA family, xanthine/uracil permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.52 0.63
    2 PP_4710 tRNA pseudouridine 55 synthase 0.51 0.54
    3 PP_3957 choline/carnitine/betaine transporter BetTC no 0.37
    4 PP_4939 conserved protein of unknown function no 0.35
    5 PP_1786 putative Glycosyl transferase no 0.35
    6 PP_4722 Transcription elongation factor GreA no 0.35
    7 PP_1320 stringent starvation protein A 0.59 0.35
    8 PP_0247 Osmolarity sensor protein EnvZ no 0.34
    9 PP_0680 ATP-dependent protease-like protein 0.56 0.33
    10 PP_1795 conserved protein of unknown function no 0.33
    11 PP_2315 Transcription elongation factor GreB 0.63 0.32
    12 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase no 0.31
    13 PP_2852 putative Sulfatase domain protein no 0.30
    14 PP_1370 Glycosyl transferase, group 1 family protein 0.28 0.30
    15 PP_1226 pre-queuosine 0 synthase 0.19 0.30
    16 PP_4859 Transcriptional regulator, TetR family 0.73 0.29
    17 PP_2081 putative phosphoenolpyruvate synthase regulatory protein 0.33 0.29
    18 PP_4977 5,10-methylenetetrahydrofolate reductase 0.65 0.29
    19 PP_1675 Subunit of adenosylcobinamide-phosphate synthase beta component no 0.29
    20 PP_1505 Phosphoenolpyruvate carboxylase 0.64 0.28

    Or look for negative cofitness